Resources
supplemental material, links to source code repositories, HowTos and more
Resources
- internal shared desk booking system
- Onboarding Guide
- Setting up jupyter with multiple conda environments
- List of Books physically present in my office (Handapparat)
- ADP lecture recordings
- Vorlesung: Einführung
- Übung: BCF/Jupyter
- Vorlesung: old School DP
- Übung: old School DP
- Vorlesung: Komponenten
- Übung: Komponenten
- Vorlesung: Implementierung
- Übung: Implementierung
- Übung: MKM
- Übung: free shift Alignment
- Vorlesung: Bellmans Prinzip
- Übung: El Mamun -
- Vorlesung: RNA
- Vorlesung: Algebra-Produkte
- Übung: Algebra-Produkte
- Vorlesung: Effizienz
- Übung: Effizienz
- Vorlesung: stochastische Modelle
- Übung: stochastische Modelle
- Übung: stoch. Modelle Teil 2
- Recordings MS-MO-ABS
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summer 2022 Mon 29.8. Tue 30.8. Wed 31.8. Thu 1.9. Fri 2.9 Introduction Bioinformatics Tour Genomics Basics Unix Basics System Check Bioinformatics first contact UCSC lab File Formats & Shell Mon 5.9. Tue 6.9. Wed 7.9. Thu 8.9. Fri 9.9 ctd. Unix Basics
sed | awk | cutNGS Basics Python RNA-seq ctd. File Formats & Shell BWA & Alignments Python TNF RNA-seq Mon 12.9. Tue 13.9. Wed 14.9. Thu 15.9. Fri 16.9 Epigenomics Downstream Analyses Galaxy part 1
Galaxy part 2TNF ChIP-seq Binding Motifs ChIP-seq in Galaxy -
summer 2021 Mon 30.8. Tue 31.8. Wed 1.9. Thu 2.9. Fri 3.9 Introduction Genomics Basics Computer Science Unix Basics part 1
Unix Basics part 2NGS Basics System Check UCSC lab Logic &&Binary Numbers File Formats & Shell BWA & Alignments Mon 6.9. Tue 7.9. Wed 8.9. Thu 9.9. Fri 10.9 R RNA-seq part 1
RNA-seq part 2
RNA-seq part 3Epigenomics Downstream Analyses Galaxy R part 1
R part 2TNF RNA-seq TNF ChIP-seq Binding Motifs ChIP-seq in Galaxy -
summer 2020 Mon 17.8. Tue 18.8. Wed 19.8. Thu 20.8. Fri 21.8 Introduction Genomics Basics Computer Science Unix Basics NGS Basics System Check UCSC lab Logic &&Binary Numbers File Formats & Shell BWA & Alignments Mon 6.9. Tue 24.8. Wed 25.8. Thu 26.8. Fri 27.8 R RNA-seq Epigenomics Downstream Analyses Galaxy R TNF RNA-seq TNF ChIP-seq Binding Motifs ChIP-seq in Galaxy
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- jlab Logo (PNG)
- jlab Logo (SVG)