Recent RNA-related publications of PIs
Kusch, S., Singh, M., Thieron, H., Spanu, P. D., and Panstruga, R. in press. Site-specific analysis reveals candidate cross-kingdom small RNAs, tRNA and rRNA fragments, and signs of fungal RNA phasing in the barley-powdery mildew interaction. Mol. Plant Pathol. (in press).
S. Kwon, O. Rupp, A. Brachmann, A. Goesmann, and M. Feldbrügge (2021) mRNA inventory of extracellular vesicles fromUstilago maydis. Submitted for publication. Preprints
https://www.preprints.org/manuscript/202106.0257/v1
Zanini S, Šečić E, Busche T, Galli M, Zheng Y, Kalinowski J, Kogel KH (2021) Comparative analysis of transcriptome and sRNAs expression patterns in the Brachypodium distachyon - Magnaporthe oryzae pathosystems. Manuscript ID: ijms-1056720
Dunker F., Lederer B., Weiberg A. (2021). Plant ARGONAUTE protein immunopurification for pathogen cross kingdom small RNA analysis. Bio Protocol 11, doi: 10.21769/BioProtoc.3911
Dunker F., Oberkofler L., Lederer B., Trutzenberg A., Weiberg A. (2020) An Arabidopsis downy mildew non-RxLR effector suppresses induced plant cell death to promote biotroph infection. J Exp Bot, doi.org/10.1093/jxb/eraa472
Dunker F., Trutzenberg A., Rothenpieler J.S., Kuhn S., Pröls R., Schreiber T., Tissier A., Hückelhoven R., Weiberg A. (2020) Oomycete small RNAs bind to the plant RNA-induced silencing complex for virulence. eLife, doi: 10.7554/eLife.56096
Cai Q., He B., Weiberg A., Buck A.H., Jin H. (2020). Small RNAs and extracellular vesicles – new mechanisms of cross-species communication and innovative tools for disease control. PLoS Pathogens, doi: 10.1371/journal.ppat.1008090
Liu S, Jaouannet M, Dempsey D’M A, Imani J, Coustau C, Kogel KH (2020) RNA-based technologies for pest control in plant production. Biotechnology Advances 39, 107463 DOI:10.1016/j.biotechadv.2019.107463
Kwon S., Tisserant C., Tulinski M., Weiberg A., and Feldbrügge M. (2019) Inside-out: from endosomes to extracellular vesicles in fungal RNA transport. Fung Biol Rev, 34: 89-99
Šečić E, Zanini S, Kogel KH (2019) Further elucidation of the ARGONAUTE and DICER protein families in the model grass species Brachypodium distachyon. Front Plant Science DOI:10.3389/fpls.2019.01332
Koch A, Höfle L, Werner BT, Imani J, Schmidt A, Jelonek L, Kogel KH (2019) SIGS vs HIGS: A study on the efficacy of two dsRNA delivery strategies to silence Fusarium FgCYP51 genes in infected host and non-host plants. Mol Plant Pathol 20(12):1636-1644 DOI:10.1111/mpp.12866
Michelet C, Danchin EGJ, Jaouannet M, Bernhagen J, Panstruga R, Kogel KH, Keller H Coustau C (2019) Cross-kingdom analysis of diversity, evolutionary history and site selection within the eukaryotic Macrophage Migration Inhibitory Factor superfamily. Genes 10, 740; DOI:10.3390/genes10100740
Gaffar FY, Imani J, Karlovsky P, Koch A, Kogel KH (2019) Different components of the RNAi machinery are required for conidiation, ascosporogenesis, virulence, DON production and fungal inhibition by exogenous dsRNA in the Head Blight pathogen Fusarium graminearum. Front Microbiol 10:1662. DOI:10.3389/fmicb.2019.01662
Zanini S, Šečić E, Jelonek L, Kogel KH (2018) A bioinformatics pipeline for the analysis and target prediction of RNA effectors in bidirectional communication during plant-microbe interactions. Front Plant Sci DOI:10.3389/fpls.2018.01212
Koch A, Stein E, Kogel KH (2018) RNA-based disease control as a complementary measure to fight Fusarium fungi through silencing of the Azole target cytochrome P450 lanosterol C-14 α-demethylase. Eu J Plant Pathol DOI:10.1007/s10658-018-1518-4
Cai Q, He B, Kogel KH & Jin H (2018) Cross-kingdom RNA trafficking and environmental RNAi — nature’s blueprint for modern crop protection strategies. Current Opinion Microbiology 46, 58-64; DOI:10.1016/j.mib.2018.02.003
Kusch S, Frantzeskakis L, Thieron H, Panstruga R. (2018) Small RNAs from cereal powdery mildew pathogens may target host plant genes. Fungal Biol. 2018 Nov;122(11):1050-1063. DOI:10.1016/j.funbio.2018.08.008. Epub 2018 Sep 11. PMID: 30342621.